BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019D07LP1|AL427478
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1496 819 0.0
>3x_Contig1496
Length = 9544
Score = 819 bits (407), Expect = 0.0
Identities = 609/675 (90%), Gaps = 8/675 (1%)
Strand = Plus / Minus
Query: 298 gtattytcacatatgarccgakatatagagaggtt-acagtakgcacatacggaataatg 356
||||| |||||||||| | || |||||| |||||| |||||| ||| |||||||||||||
Sbjct: 6505 gtattttcacatatgagcagagatatagggaggtttacagtaggcaaatacggaataatg 6446
Query: 357 cagtgatatcaagcatmtcttgcttgagtgtgggttacttaatttgacacactaaccgaa 416
|||| |||| |||||| |||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 6445 cagtcatattaagcatttcttgcttgagtttgggttacttaatttgacacaataaccgaa 6386
Query: 417 ctctttctctctgacatatcttaaggctttmtaaccat-aaaragawatagtatgtggca 475
|| |||||||||||||| |||||||||||| ||||||| ||| ||| ||||||| |||||
Sbjct: 6385 ctttttctctctgacatttcttaaggctttttaaccataaaaaagaaatagtatttggca 6326
Query: 476 aaagtagtatgaatatagataatgtcgagadatagtgtgtcatttcaagtggtagataga 535
||||||||||||||| |||||||||||| | ||||||| |||||||||||||||||||||
Sbjct: 6325 aaagtagtatgaataaagataatgtcgaaaaatagtgtttcatttcaagtggtagataga 6266
Query: 536 ttgctbtgccgtgagattgtggatagagttctaacttggrgatgtactttgtatagtgat 595
|| || |||||| | |||||||||| ||||||||||||| |||||||||||| |||||||
Sbjct: 6265 tttctttgccgttaaattgtggataaagttctaacttgg-gatgtactttgtttagtgat 6207
Query: 596 atcatcgcattgtgagctagtcacacttagcacgtgagagtcgtgtgtatatcactcgag 655
||||||||| ||| ||||||||||||||||||||||| |||||| | ||||||||||||
Sbjct: 6206 atcatcgca-tgttagctagtcacacttagcacgtgaaagtcgttttaatatcactcgag 6148
Query: 656 tgctgtrtgataattaggttcatatctgmactcactgggtgtsahtcttcgtcgcattta 715
|||||| |||||||||||||||| |||| |||||||||| || | |||||||||| ||
Sbjct: 6147 tgctgtatgataattaggttcatttctgaactcactgggggtaattcttcgtcgccattt 6088
Query: 716 attgttgag-aaaaaaggatggcgctttgggcgygtgacgatacatatatctcggctacc 774
||||||||| |||||||||| |||| ||||||| || |||||||||||||||||||||||
Sbjct: 6087 attgttgagaaaaaaaggat-gcgccttgggcgggtaacgatacatatatctcggctacc 6029
Query: 775 ttcggtkatttttaaagagattgaggattttcggcaaccttcggtgatacag-ccacctt 833
|||||| |||||||| ||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 6028 ttcggttatttttaaggagattgaggattttcggcaaccttcggtaatacagcccacctt 5969
Query: 834 gtagtaccgactttatccgtgatgtctgcktttcacttttggatgcggcgagtcacggac 893
||||||||||| ||||||||||||||||| || |||||||||||||||| |||||||||
Sbjct: 5968 gtagtaccgaccttatccgtgatgtctgctttccacttttggatgcggcaagtcacggaa 5909
Query: 894 atgtgacgtactattagctgtatcgcacatggagctgtgtgatg-agaacgaattcattg 952
|||||| ||||||||||| | |||||||||||||||| |||||| |||||||||||||||
Sbjct: 5908 atgtgaggtactattagccgaatcgcacatggagctgggtgatgaagaacgaattcattg 5849
Query: 953 tcacgtggatwtttt 967
|||||||||| ||||
Sbjct: 5848 tcacgtggatatttt 5834
Score = 519 bits (258), Expect = e-147
Identities = 265/266 (99%), Gaps = 1/266 (0%)
Strand = Plus / Minus
Query: 1 gctttagttttttcctatatgaaaatctatgctatactggaaaatttcaggtatcaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6806 gctttagttttttcctatatgaaaatctatgctatactggaaaatttcaggtatcaataa 6747
Query: 61 tgctattaagttgtcaaactcagagaaatattacacgcaaatacatatatatatatatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6746 tgctattaagttgtcaaactcagagaaatattacacgcaaatacatatatatatatatat 6687
Query: 121 atatgtatgattgcataattcacatattaaggtatttaagcacggattgagagacataga 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 6686 atatgtatgattgcataattcacatattaaggtatttaag-acggattgagagacataga 6628
Query: 181 tctggaaacggagcctgaaatactacttgcattgactgcagcataaccactaagaaccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6627 tctggaaacggagcctgaaatactacttgcattgactgcagcataaccactaagaaccgt 6568
Query: 241 caataaccgcattatatctaacttac 266
||||||||||||||||||||||||||
Sbjct: 6567 caataaccgcattatatctaacttac 6542
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,752
Number of Sequences: 1807
Number of extensions: 10752
Number of successful extensions: 2143
Number of sequences better than 1.0e-20: 1
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.2 bits)